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Results for Single-cell Genomics

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1 - 10 of 48

Wanding Zhou, PhD
Wanding Zhou

Dr. Zhou’s outstanding research interests include mitosis-coupled DNA methylation drift and inference of cell-type-specific epigenetic signals. He developed multiple computational tools for analyzing DNA methylation data and has actively contributed to cancer genomics data analysis.

E-mail:
zhouw3 [at] chop.edu
Kristina A. Cole, MD, PhD
Kristina A. Cole

Dr. Cole is a pediatric neuro-oncologist who has dedicated her career to translational and clinical research, combining her expertise in molecular pathology, cancer genomics, and developmental therapeutics to identify novel treatments for children with cancer.

E-mail:
colek [at] chop.edu
Kai Tan, PhD
Kai Tan

Dr. Tan uses experimental and computational approaches to study normal development and cancer. His laboratory is using the integrative approach to dissect the gene regulatory networks controlling embryonic hematopoiesis, T cell differentiation, and oncogenesis. He is also developing computational algorithms for constructing models of transcriptional regulatory and signaling networks by integrating multi-dimensional genomic, epigenomic, and transcriptomic datasets.

E-mail:
tank1 [at] chop.edu
John M. Maris, MD
John M. Maris

Dr. Maris investigates the molecular and genetic mechanisms contributing to the development and progression of neuroblastoma, a common childhood cancer. He also aims to develop new molecular diagnostic tests and less toxic, targeted therapies to treat relapsed or refractory neuroblastoma, including a major effort in immunotherapy discovery and development.

E-mail:
maris [at] chop.edu

In the News: Top Pediatrics Program for Medical Schools, First-of-Its-Kind Gene Therapy Trial, Novel Computational Tool

Published on
May 26, 2023
in Cornerstone Blog
In the News: Top Pediatrics Program for Medical Schools, Rare Disease Research, Novel Tool
In this week’s news roundup, CHOP’s Department of Pediatrics ranked No 1. in U.S. News & World Report’s ‘Best Pediatrics Programs’ for medical schools.

'New Technologies Lead to New Discoveries': Q&A With HHMI Scholar Mustafa Mir, PhD

Published on
May 9, 2023
in Cornerstone Blog
HHMI Scholar
Mustafa Mir, PhD, in the Center for Computation and Genomic Medicine, was selected as a Howard Hughes Medical Institute Freeman Hrabowski Scholar.

Meet the 2023 Distinguished Research Trainee Award Recipients

Published on
May 8, 2023
in Cornerstone Blog
Meet the 2023 Distinguished Research Trainee Award Recipients
Four researchers-in-training at Children’s Hospital of Philadelphia received the 2023 Distinguished Research Trainee Award.

Single Cell Technology Core Data Analysis Services

Published on
Mar 8, 2023
in Announcements
Single Cell Technology Core Data Analysis Services
The Single Cell Technology Core provides data analysis services to support the CHOP/UPenn research community.

In the News: ASCI Membership, STAT Madness, Brain Chart, Single Ventricle Research Fund

Published on
Mar 3, 2023
in Cornerstone Blog
In the News: ASCI Membership, STAT Madness, Brain Chart
In this news roundup, learn about the achievements of CHOP researchers from societal inductions to grant- and grand-prize recipients.

Snapshot Science: How Can Single-cell Sequencing Overcome Computational Limitations?

Published on
Jan 30, 2023
in Cornerstone Blog
Researchers Develop Single-cell Multimodal Deep Clustering Software Tool
New software uses machine learning to analyze data about a single cell’s multiple characteristics.
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In this section

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  • Principal Investigator / Faculty (4)

Organizations

  • Department of Biomedical and Health Informatics (11)
  • Center for Applied Genomics (8)
  • Center for Computational and Genomic Medicine (7)
  • Department of Pathology and Laboratory Medicine (6)
  • Center for Single Cell Biology (5)
  • Department of Pediatrics (5)
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  • Center for Childhood Cancer Research (2)
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  • Clinical Futures (2)
  • Division of Emergency Medicine (2)
  • Division of Oncology (2)
  • Mitochondrial Medicine (2)
  • Raymond G. Perelman Center for Cellular and Molecular Therapeutics (2)
  • Research in the Department of Child and Adolescent Psychiatry and Behavioral Services (2)
  • Single Cell Technology Core (2)
  • Brain-Gene-Development Lab (1)
  • CAG Sequencing Core (1)
  • Center for Applied Genomics Laboratory (1)
  • Center for Autism Research (1)
  • Center for Pediatric Heart Valve Disorders (1)
  • Center for Spatial and Functional Genomics (1)
  • CHOP Cardiovascular Institute (1)
  • Congenital Hyperinsulinism Research Laboratory (1)
  • Cystic Fibrosis-Related Diabetes Research Program (1)
  • DBHi Bioinformatics (1)
  • Department of Radiology (1)
  • Department of Surgery (1)
  • Division of Allergy and Immunology (1)
  • Division of Endocrinology and Diabetes (1)
  • Division of Gastroenterology, Hepatology, and Nutrition (1)
  • Division of General Pediatrics (1)
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  • Division of Plastic, Reconstructive and Oral Surgery (1)
  • Lefebvre Laboratory (1)
  • Lifespan Brain Institute (1)
  • Lin Laboratory (1)
  • Minds Matter Concussion Program (1)
  • Office of Academic Training and Outreach Programs (1)
  • Pei Laboratory (1)
  • Penn-CHOP Kidney Innovation Center (1)
  • Roberts Individualized Medical Genetics Center (1)
  • Romberg Laboratory (1)
  • The Resuscitation Science Center (1)
  • Translational Research Program in Pediatric Orthopaedics (1)

In this section

Filter By

  • Principal Investigator / Faculty (4)

Organizations

  • Department of Biomedical and Health Informatics (11)
  • Center for Applied Genomics (8)
  • Center for Computational and Genomic Medicine (7)
  • Department of Pathology and Laboratory Medicine (6)
  • Center for Single Cell Biology (5)
  • Department of Pediatrics (5)
  • Center for Injury Research and Prevention (3)
  • Division of Pulmonary and Sleep Medicine (3)
  • Center for Childhood Cancer Research (2)
  • Center for Data-Driven Discovery in Biomedicine (2)
  • Clinical Futures (2)
  • Division of Emergency Medicine (2)
  • Division of Oncology (2)
  • Mitochondrial Medicine (2)
  • Raymond G. Perelman Center for Cellular and Molecular Therapeutics (2)
  • Research in the Department of Child and Adolescent Psychiatry and Behavioral Services (2)
  • Single Cell Technology Core (2)
  • Brain-Gene-Development Lab (1)
  • CAG Sequencing Core (1)
  • Center for Applied Genomics Laboratory (1)
  • Center for Autism Research (1)
  • Center for Pediatric Heart Valve Disorders (1)
  • Center for Spatial and Functional Genomics (1)
  • CHOP Cardiovascular Institute (1)
  • Congenital Hyperinsulinism Research Laboratory (1)
  • Cystic Fibrosis-Related Diabetes Research Program (1)
  • DBHi Bioinformatics (1)
  • Department of Radiology (1)
  • Department of Surgery (1)
  • Division of Allergy and Immunology (1)
  • Division of Endocrinology and Diabetes (1)
  • Division of Gastroenterology, Hepatology, and Nutrition (1)
  • Division of General Pediatrics (1)
  • Division of Hematology (1)
  • Division of Neonatology (1)
  • Division of Nephrology (1)
  • Division of Orthopaedic Surgery (1)
  • Division of Plastic, Reconstructive and Oral Surgery (1)
  • Lefebvre Laboratory (1)
  • Lifespan Brain Institute (1)
  • Lin Laboratory (1)
  • Minds Matter Concussion Program (1)
  • Office of Academic Training and Outreach Programs (1)
  • Pei Laboratory (1)
  • Penn-CHOP Kidney Innovation Center (1)
  • Roberts Individualized Medical Genetics Center (1)
  • Romberg Laboratory (1)
  • The Resuscitation Science Center (1)
  • Translational Research Program in Pediatric Orthopaedics (1)
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